Sodalis
Sodalis is a genus of bacteria within the family Pectobacteriaceae. This genus contains several insect endosymbionts and also free-living group. It is studied due to its potential use in biological control of tsetse fly. Sodalis is important model for evolutionary biologists because of its nascent endosymbiosis with insect.
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| Genus: | Sodalis Dale and Maudlin 1999 |
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Occurrence and ecological significance
Sodalis was described in louse fly (Craterina melbae),[2] in stinkbug (Cantao ocellatus) [3] in Louse (Columbicola columbae) [4] and in other ectoparasites of water mammals (like Proechinophthirus fluctus, Louse).[5]
Species Candidatus Sodalis melophagi was described in sheep ked (Melophagus ovinus).[6]
Another species Candidatus Sodalis pierantonius str. SOPE is known as endosymbiont of rice weevil (Sitophilus oryzae) and can supply rice weevil with essential vitamins like pantothenic acid, riboflavin, and biotin.[7]
A species of bacteria within this genera, Sodalis glossinidius, was found in the hemolymph of the tsetse fly (Glossina morsitans).[8] This bacteria has been used in paratransgenesis approaches to fight sleeping sickness.[9] Genome analysis shows that symbiosis between Sodalis glossinidius and tsetse fly is evolutionary young. Sodalis has large genome and pseudogenes which remain, however, active in cell-free culture.[10] Fly cleared from its native symbionts can be successfully repopulated by Sodalis from other fly species.[11] This might be used in potential biological control of tsetse fly.
Free-living species
The Sodalis bacterium has also been identified as free-living with no association to insects.
Sodalis praecaptivus, was isolated from a hand injured by a tree branch.[12]
Sodalis ligni was found to be widely associated with decomposing wood of various tree species.[13] S. ligni, unlike other Sodalis species, contains nitrogen fixation genes. Such ecological trait might be important for other saprotrophs living in deadwood as this habitat is nitrogen-limited.[14]
Compared to endosymbionts, free-living Sodalis species are characterized by larger genomes, longer genes, and fewer pseudogenes. These characteristics point to asymbiotic lifestyle of these species. Due to known free-living species and related endosymbionts with evolutionarily young link to insect, the whole genus is important for studies about development of the insect endosymbiosis.
References
- Oakeson, KF; Gil, R; Clayton, AL; Dunn, DM; von Niederhausern, AC; Hamil, C; Aoyagi, A; Duval, B; Baca, A; Silva, FJ; Vallier, A; Jackson, DG; Latorre, A; Weiss, RB; Heddi, A; Moya, A; Dale, C (Jan 2014). "Genome degeneration and adaptation in a nascent stage of symbiosis". Genome Biology and Evolution. 6 (1): 76–93. doi:10.1093/gbe/evt210. PMC 3914690. PMID 24407854.
- Novakova, Eva; Hypsa, Vaclav (April 2007). "A new Sodalis lineage from bloodsucking fly Craterina melbae (Diptera, Hippoboscoidea) originated independently of the tsetse flies symbiont Sodalis glossinidius". FEMS Microbiology Letters. 269 (1): 131–135. doi:10.1111/j.1574-6968.2006.00620.x. PMID 17227456.
- Kaiwa, Nahomi; Hosokawa, Takahiro; Kikuchi, Yoshitomo; Nikoh, Naruo; Meng, Xian Ying; Kimura, Nobutada; Ito, Motomi; Fukatsu, Takema (2010-06-01). "Primary Gut Symbiont and Secondary, Sodalis-Allied Symbiont of the Scutellerid Stinkbug Cantao ocellatus". Applied and Environmental Microbiology. 76 (11): 3486–3494. Bibcode:2010ApEnM..76.3486K. doi:10.1128/AEM.00421-10. ISSN 0099-2240. PMC 2876435. PMID 20400564.
- Fukatsu, Takema; Koga, Ryuichi; Smith, Wendy A.; Tanaka, Kohjiiro; Nikoh, Naruo; Sasaki-Fukatsu, Kayoko; Yoshizawa, Kazunori; Dale, Colin; Clayton, Dale H. (2007-10-15). "Bacterial Endosymbiont of the Slender Pigeon Louse, Columbicola columbae, Allied to Endosymbionts of Grain Weevils and Tsetse Flies". Applied and Environmental Microbiology. 73 (20): 6660–6668. Bibcode:2007ApEnM..73.6660F. doi:10.1128/AEM.01131-07. ISSN 0099-2240. PMC 2075037. PMID 17766458.
- Boyd, Bret M.; Allen, Julie M.; Koga, Ryuichi; Fukatsu, Takema; Sweet, Andrew D.; Johnson, Kevin P.; Reed, David L. (2016-06-01). "Two Bacterial Genera, Sodalis and Rickettsia, Associated with the Seal Louse Proechinophthirus fluctus (Phthiraptera: Anoplura)". Applied and Environmental Microbiology. 82 (11): 3185–3197. Bibcode:2016ApEnM..82.3185B. doi:10.1128/AEM.00282-16. ISSN 0099-2240. PMC 4959230. PMID 26994086.
- Chrudimský, Tomáš; Husník, Filip; Nováková, Eva; Hypša, Václav (2012-07-17). "Candidatus Sodalis melophagi sp. nov.: Phylogenetically Independent Comparative Model to the Tsetse Fly Symbiont Sodalis glossinidius". PLOS ONE. 7 (7): e40354. Bibcode:2012PLoSO...740354C. doi:10.1371/journal.pone.0040354. ISSN 1932-6203. PMC 3398932. PMID 22815743.
- Heddi, A.; Grenier, A.-M.; Khatchadourian, C.; Charles, H.; Nardon, P. (1999-06-08). "Four intracellular genomes direct weevil biology: Nuclear, mitochondrial, principal endosymbiont, and Wolbachia". Proceedings of the National Academy of Sciences. 96 (12): 6814–6819. Bibcode:1999PNAS...96.6814H. doi:10.1073/pnas.96.12.6814. ISSN 0027-8424. PMC 21998. PMID 10359795.
- Dale, C.; Maudlin, I. (1 January 1999). "Sodalis gen. nov. and Sodalis glossinidius sp. nov., a microaerophilic secondary endosymbiont of the tsetse fly Glossina morsitans morsitans". International Journal of Systematic Bacteriology. 49 (1): 267–275. doi:10.1099/00207713-49-1-267. PMID 10028272.
- De Vooght, Linda; Caljon, Guy; De Ridder, Karin; Van Den Abbeele, Jan (2014-11-07). "Delivery of a functional anti-trypanosome Nanobody in different tsetse fly tissues via a bacterial symbiont, Sodalis glossinidius". Microbial Cell Factories. 13: 156. doi:10.1186/s12934-014-0156-6. ISSN 1475-2859. PMC 4230353. PMID 25376234.
- Goodhead, Ian; Blow, Frances; Brownridge, Philip; Hughes, Margaret; Kenny, John; Krishna, Ritesh; McLean, Lynn; Pongchaikul, Pisut; Beynon, Rob; Darby, Alistair C. (2020). "Large-scale and significant expression from pseudogenes in Sodalis glossinidius – a facultative bacterial endosymbiont". Microbial Genomics. 6 (1): e000285. doi:10.1099/mgen.0.000285. PMC 7067036. PMID 31922467.
- Weiss, Brian L.; Mouchotte, Rosa; Rio, Rita V. M.; Wu, Yi-neng; Wu, Zheyang; Heddi, Abdelaziz; Aksoy, Serap (2006-11-01). "Interspecific Transfer of Bacterial Endosymbionts between Tsetse Fly Species: Infection Establishment and Effect on Host Fitness". Applied and Environmental Microbiology. 72 (11): 7013–7021. Bibcode:2006ApEnM..72.7013W. doi:10.1128/AEM.01507-06. ISSN 0099-2240. PMC 1636136. PMID 16950907.
- Chari, Abhishek; Oakeson, Kelly F.; Enomoto, Shinichiro; Jackson, D. Grant; Fisher, Mark A.; Dale, Colin (2015-05-01). "Phenotypic characterization of Sodalis praecaptivus sp. nov., a close non-insect-associated member of the Sodalis-allied lineage of insect endosymbionts". International Journal of Systematic and Evolutionary Microbiology. 65 (Pt_5): 1400–1405. doi:10.1099/ijs.0.000091. ISSN 1466-5026. PMC 4635462. PMID 25782768.
- Tláskal, Vojtěch; Pylro, Victor Satler; Žifčáková, Lucia; Baldrian, Petr (2021-06-11). "Ecological Divergence Within the Enterobacterial Genus Sodalis: From Insect Symbionts to Inhabitants of Decomposing Deadwood". Frontiers in Microbiology. 12: 668644. doi:10.3389/fmicb.2021.668644. ISSN 1664-302X. PMC 8226273. PMID 34177846. S2CID 235397197.
- Tláskal, Vojtěch; Brabcová, Vendula; Větrovský, Tomáš; Jomura, Mayuko; López-Mondéjar, Rubén; Oliveira Monteiro, Lummy Maria; Saraiva, João Pedro; Human, Zander Rainier; Cajthaml, Tomáš; Nunes da Rocha, Ulisses; Baldrian, Petr (2021-02-23). Faust, Karoline (ed.). Yahya Kooch, Maraike Probst. "Complementary Roles of Wood-Inhabiting Fungi and Bacteria Facilitate Deadwood Decomposition". mSystems. 6 (1). doi:10.1128/mSystems.01078-20. ISSN 2379-5077. PMC 7901482. PMID 33436515.